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EndoCoT: Scaling Endogenous Chain-of-Thought Reasoning in Diffusion Models

arXiv cs.CL / 3/13/2026

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Key Points

  • EndoCoT introduces an endogenous chain-of-thought framework that activates MLLMs' reasoning by iteratively refining latent thought states through an iterative thought guidance module, then connects these states to the diffusion model's denoising process.
  • It addresses two key limitations of using MLLMs as text encoders in diffusion frameworks: insufficient multi-step reasoning from single-step encoding and invariant guidance during decoding, enabling progressive reasoning and grounding with textual supervision.
  • The authors report strong results across Maze, TSP, VSP, and Sudoku, achieving an average accuracy of 92.1% and beating the strongest baseline by 8.3 percentage points.
  • Overall, EndoCoT demonstrates how guiding endogenous reasoning can enable diffusion models to solve complex tasks step-by-step.

Abstract

Recently, Multimodal Large Language Models (MLLMs) have been widely integrated into diffusion frameworks primarily as text encoders to tackle complex tasks such as spatial reasoning. However, this paradigm suffers from two critical limitations: (i) MLLMs text encoder exhibits insufficient reasoning depth. Single-step encoding fails to activate the Chain-of-Thought process, which is essential for MLLMs to provide accurate guidance for complex tasks. (ii) The guidance remains invariant during the decoding process. Invariant guidance during decoding prevents DiT from progressively decomposing complex instructions into actionable denoising steps, even with correct MLLM encodings. To this end, we propose Endogenous Chain-of-Thought (EndoCoT), a novel framework that first activates MLLMs' reasoning potential by iteratively refining latent thought states through an iterative thought guidance module, and then bridges these states to the DiT's denoising process. Second, a terminal thought grounding module is applied to ensure the reasoning trajectory remains grounded in textual supervision by aligning the final state with ground-truth answers. With these two components, the MLLM text encoder delivers meticulously reasoned guidance, enabling the DiT to execute it progressively and ultimately solve complex tasks in a step-by-step manner. Extensive evaluations across diverse benchmarks (e.g., Maze, TSP, VSP, and Sudoku) achieve an average accuracy of 92.1%, outperforming the strongest baseline by 8.3 percentage points.