Diagnosis, Bad Planning & Reasoning. Treatment, SCOPE -- Planning for Hybrid Querying over Clinical Trial Data

arXiv cs.CL / 4/29/2026

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Key Points

  • The paper examines clinical-trial table question answering where answers are not visible in cells and must be derived via semantic normalization, classification, extraction, or lightweight domain reasoning.
  • It argues that many LLM methods produce “bad reasoning” when they rely on implicit planning assumptions, especially when key attributes (e.g., therapy type, added agents, endpoint roles, follow-up status) are only partially observed.
  • The authors propose SCOPE, a structured hybrid planning framework using multiple LLMs to decompose the task into row selection, explicit planning, and execution, making source fields, reasoning rules, and output constraints explicit.
  • In experiments on 1,500 oncology hybrid reasoning questions, SCOPE improves accuracy versus several baselines (zero-shot, few-shot, chain-of-thought, TableGPT2, Blend-SQL, EHRAgent) and achieves a better accuracy–efficiency tradeoff than heavier agentic systems.
  • The work frames “clinical trial reasoning” as a distinct table understanding problem and suggests that hybrid planner-based decomposition is an effective approach for evidence retrieval tasks.

Abstract

We study clinical trial table reasoning, where answers are not directly stored in visible cells but must be reasoned from semantic understanding through normalization, classification, extraction, or lightweight domain reasoning. Motivated by the observation that current LLM approaches often suffer from "bad reasoning" under implicit planning assumptions, we focus on settings in which the model must recover implicit attributes such as therapy type, added agents, endpoint roles, or follow-up status from partially observed clinical-trial tables. We propose SCOPE (Structured Clinical hybrid Planning for Evidence retrieval in clinical trials), a multi-LLM planner-based framework that decomposes the task into row selection, structured planning, and execution. The planner makes the source field, reasoning rules, and output constraints explicit before answer generation, reducing ambiguity relative to direct prompting. We evaluate SCOPE on 1,500 hybrid reasoning questions over oncology clinical-trial tables against zero-shot, few-shot, chain-of-thought, TableGPT2, Blend-SQL, and EHRAgent. Results show that explicit multi-LLM planning improves accuracy for reasoning-based questions while offering a stronger accuracy-efficiency tradeoff than heavier agentic baselines. Our findings position clinical trial reasoning as a distinct table understanding problem and highlight hybrid planner-based decomposition as an effective solution